Resources

• scDissector on Github (under development)
• Crohn’s scRNA-seq ( martin et al. Cell 2019)
  • Full ileum dataset online visualization via scDissector 
  • Processed UMI tables on GEO
  • Raw reads (fastq files) on SRA
  • Cell annotations- A table mapping cells and clusters and their annotations.
  • GIMATS scores gene lists – scRNA-seq based gene lists used for scoring bulk RNA samples
• Mouse single cell RNA-seq (Jaitin et al. Science 2014)
• Conserved elements in flies
• MARS-seq2.0 pipeline

 

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